targets::tar_visnetwork()Le chargement a nécessité le package : geometry
Le chargement a nécessité le package : ape
Le chargement a nécessité le package : rcdd
If you want correct answers, use rational arithmetic.
See the Warnings sections in help pages for
functions that do computational geometry.targets::tar_read(species_niche)[1] "figures/niches_community_col.png"knitr::include_graphics("figures/niches_community_col.png")
targets::tar_read(overlap_mx) Serrivomer beanii Xenodermichthys copei
Serrivomer beanii 1.00 0.05
Xenodermichthys copei 0.04 1.00
Maurolicus muelleri 0.00 0.46
Benthosema glaciale 0.00 0.00
Myctophum punctatum 0.31 0.33
Argyropelecus olfersii 0.18 0.00
Lampanyctus crocodilus 0.09 0.00
Arctozenus risso 0.00 0.07
Lestidiops sphyrenoides 0.00 0.03
Cyclothone spp. 0.00 0.00
Notoscopelus bolini 0.00 0.00
Notoscopelus kroyeri 0.00 0.00
Melanostigma atlanticum 0.00 0.00
Lampanyctus macdonaldi 0.00 0.00
Searsia koefoedi 0.00 0.00
Maulisia argipalla 0.00 0.00
Maurolicus muelleri Benthosema glaciale
Serrivomer beanii 0.00 0.00
Xenodermichthys copei 0.14 0.00
Maurolicus muelleri 1.00 0.00
Benthosema glaciale 0.00 1.00
Myctophum punctatum 0.00 0.12
Argyropelecus olfersii 0.00 0.42
Lampanyctus crocodilus 0.00 0.25
Arctozenus risso 0.00 0.00
Lestidiops sphyrenoides 0.00 0.00
Cyclothone spp. 0.00 0.05
Notoscopelus bolini 0.00 0.00
Notoscopelus kroyeri 0.00 0.00
Melanostigma atlanticum 0.00 0.00
Lampanyctus macdonaldi 0.00 0.00
Searsia koefoedi 0.00 0.00
Maulisia argipalla 0.00 0.00
Myctophum punctatum Argyropelecus olfersii
Serrivomer beanii 0.44 0.13
Xenodermichthys copei 0.35 0.00
Maurolicus muelleri 0.00 0.00
Benthosema glaciale 0.12 0.22
Myctophum punctatum 1.00 0.31
Argyropelecus olfersii 0.61 1.00
Lampanyctus crocodilus 0.32 0.37
Arctozenus risso 0.16 0.10
Lestidiops sphyrenoides 0.00 0.00
Cyclothone spp. 0.00 0.07
Notoscopelus bolini 0.00 0.00
Notoscopelus kroyeri 0.00 0.00
Melanostigma atlanticum 0.00 0.00
Lampanyctus macdonaldi 0.00 0.00
Searsia koefoedi 0.00 0.00
Maulisia argipalla 0.00 0.00
Lampanyctus crocodilus Arctozenus risso
Serrivomer beanii 0.17 0.00
Xenodermichthys copei 0.00 0.04
Maurolicus muelleri 0.00 0.00
Benthosema glaciale 0.34 0.00
Myctophum punctatum 0.43 0.08
Argyropelecus olfersii 0.98 0.10
Lampanyctus crocodilus 1.00 0.12
Arctozenus risso 0.31 1.00
Lestidiops sphyrenoides 0.00 0.74
Cyclothone spp. 0.49 0.00
Notoscopelus bolini 0.00 0.01
Notoscopelus kroyeri 0.00 0.00
Melanostigma atlanticum 0.10 0.00
Lampanyctus macdonaldi 0.00 0.00
Searsia koefoedi 0.00 0.00
Maulisia argipalla 0.00 0.00
Lestidiops sphyrenoides Cyclothone spp.
Serrivomer beanii 0.00 0.00
Xenodermichthys copei 0.01 0.00
Maurolicus muelleri 0.00 0.00
Benthosema glaciale 0.00 0.03
Myctophum punctatum 0.00 0.00
Argyropelecus olfersii 0.00 0.08
Lampanyctus crocodilus 0.00 0.21
Arctozenus risso 0.43 0.00
Lestidiops sphyrenoides 1.00 0.00
Cyclothone spp. 0.00 1.00
Notoscopelus bolini 0.22 0.24
Notoscopelus kroyeri 0.09 0.54
Melanostigma atlanticum 0.00 0.55
Lampanyctus macdonaldi 0.00 0.17
Searsia koefoedi 0.00 0.05
Maulisia argipalla 0.00 0.00
Notoscopelus bolini Notoscopelus kroyeri
Serrivomer beanii 0.00 0.00
Xenodermichthys copei 0.00 0.00
Maurolicus muelleri 0.00 0.00
Benthosema glaciale 0.00 0.00
Myctophum punctatum 0.00 0.00
Argyropelecus olfersii 0.00 0.00
Lampanyctus crocodilus 0.00 0.00
Arctozenus risso 0.01 0.00
Lestidiops sphyrenoides 0.25 0.12
Cyclothone spp. 0.14 0.36
Notoscopelus bolini 1.00 0.76
Notoscopelus kroyeri 0.65 1.00
Melanostigma atlanticum 0.33 0.54
Lampanyctus macdonaldi 0.12 0.17
Searsia koefoedi 0.07 0.06
Maulisia argipalla 0.00 0.00
Melanostigma atlanticum Lampanyctus macdonaldi
Serrivomer beanii 0.00 0.00
Xenodermichthys copei 0.00 0.00
Maurolicus muelleri 0.00 0.00
Benthosema glaciale 0.00 0.00
Myctophum punctatum 0.00 0.00
Argyropelecus olfersii 0.00 0.00
Lampanyctus crocodilus 0.04 0.00
Arctozenus risso 0.00 0.00
Lestidiops sphyrenoides 0.01 0.00
Cyclothone spp. 0.48 0.24
Notoscopelus bolini 0.51 0.29
Notoscopelus kroyeri 0.72 0.36
Melanostigma atlanticum 1.00 0.59
Lampanyctus macdonaldi 0.37 1.00
Searsia koefoedi 0.18 0.43
Maulisia argipalla 0.00 0.16
Searsia koefoedi Maulisia argipalla
Serrivomer beanii 0.00 0.00
Xenodermichthys copei 0.00 0.00
Maurolicus muelleri 0.00 0.00
Benthosema glaciale 0.00 0.00
Myctophum punctatum 0.00 0.00
Argyropelecus olfersii 0.00 0.00
Lampanyctus crocodilus 0.00 0.00
Arctozenus risso 0.00 0.00
Lestidiops sphyrenoides 0.00 0.00
Cyclothone spp. 0.11 0.00
Notoscopelus bolini 0.29 0.00
Notoscopelus kroyeri 0.24 0.00
Melanostigma atlanticum 0.50 0.00
Lampanyctus macdonaldi 0.74 0.09
Searsia koefoedi 1.00 0.30
Maulisia argipalla 1.00 1.00knitr::include_graphics("figures/matrix_overlap.png")